Repair Yum Repository Metadata

Nexus may have trouble generating or regenerating repository metadata (for example, repodata/repomd.xml), especially for larger repositories. Configure the Repair - Rebuild Yum repository metadata (repodata) task in Nexus to create the metadata if the standard generation fails. This is not typically needed, so it is considered to be a repair task.

The example in this procedure is for creating a repair task to rebuild Yum metadata for the mirror-1.3.0-opensuse-leap-15 repository.

See the Nexus documentation on tasks for more information.

Prerequisites

CSM installation is complete.

System domain name

The SYSTEM_DOMAIN_NAME value found in some of the URLs on this page is expected to be the system’s fully qualified domain name (FQDN).

(ncn-mw#) The FQDN can be found by running the following command on any Kubernetes NCN.

kubectl get secret site-init -n loftsman -o jsonpath='{.data.customizations\.yaml}' | base64 -d | yq r - spec.network.dns.external

Example output:

system.hpc.amslabs.hpecorp.net

Be sure to modify the example URLs on this page by replacing SYSTEM_DOMAIN_NAME with the actual value found using the above command.

Nexus web URL

Nexus is accessible using a web browser at the following URL: https://nexus.cmn.SYSTEM_DOMAIN_NAME

An example of what the resulting URL will look like is: https://nexus.cmn.eniac.dev.cray.com.

Procedure

  1. Log in to the Nexus web UI.

    Users will need to log in through the Nexus UI. The account is configured through Keycloak with a role mapping for Nexus authentication. The role needed for administrative permissions is nx-admin in the system-nexus-client role. Scripts may connect by using a username and password in the request.

    Keycloak Adding Permissions

    Nexus Web UI

  2. Click on the gear icon at the top of the page.

    Clicking on the gear will open up the repository administration page.

    Repository Administration Page

  3. Click on Tasks in the navigation bar on the left-hand side of the page.

    The Tasks button is under the System heading.

    Tasks Page

  4. Click the Create Task button.

    Clicking the Create Task button will open up the following page. Select the type of task. For this example, the Create Repair - Rebuild Yum repository metadata (repodata) option would be selected.

    Task Type Selection

  5. Enter the required information for the task, such as the task name, repository, and task frequency.

    Click the Create task at the bottom of the page after entering all required information about the task.

    Create Task

    The new task will now be available on the main Tasks page.

  6. Click on the newly created task.

    New Task on Task Page

  7. Click the Run button at the top of the page.

    Run a Task

    Select Yes when the confirmation pop-up appears.

    Task Confirmation

    There will now be information about the run that was just scheduled on the main Tasks page.

    Tasks Page

  8. Click on the box icon in the navigation bar at the top of the page, then click Browse in the navigation bar on the left-hand side of the page.

    Browse Page

  9. Track down the name of the repository being repaired.

    In this example, mirror-1.3.0-opensuse-leap-15 is used.

  10. View the repodata for the repository.

    Repodata Summary

    Repodata Attributes

  11. (ncn-mw#) View the log file on the system.

    Even though the Nexus logs contains messages pertaining to tasks, it can be difficult to track messages for a specific task, especially because rebuilding Yum metadata takes a long time.

    1. Retrieve the Nexus pod name.

      kubectl -n nexus get pods | grep nexus

      Example output:

      nexus-55d8c77547-65k6q              2/2     Running     1          22h

    2. Access the running Nexus pod.

      kubectl -n nexus exec -ti nexus-55d8c77547-65k6q -c nexus -- ls -ltr /nexus-data/log/tasks

      Example output:

      total 8
-rw-r--r-- 1 nexus nexus 1763 Aug 23 00:50 repository.yum.rebuild.metadata-20200822235306934.log
-rw-r--r-- 1 nexus nexus 1525 Aug 23 01:00 repository.cleanup-20200823010000013.log

      If multiple repositories are being rebuilt, search the logs for the specific repository to find the latest corresponding log file. The example below is for mirror-1.3.0-opensuse-leap-15:

      kubectl -n nexus exec -ti nexus-55d8c77547-65k6q -c nexus -- grep -R 'Rebuilding yum metadata for repository mirror-1.3.0-opensuse-leap-15' /nexus-data/log/tasks

      Example output:

      /nexus-data/log/tasks/repository.yum.rebuild.metadata-20200822235306934.log:2020-08-22 23:53:06,936+0000 INFO  [event-12-thread-797]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl - Rebuilding yum metadata for repository mirror-1.3.0-opensuse-leap-15

    3. View the log file for the rebuild.

      The log file for a successful rebuild will look similar to the following:

      kubectl -n nexus exec -ti nexus-55d8c77547-65k6q -c nexus -- cat /nexus-data/log/tasks/repository.yum.rebuild.metadata-20200822235306934.log

      Example output:

      2020-08-22 23:53:06,934+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask - Task information:
2020-08-22 23:53:06,935+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  ID: 35536bcd-3947-4ba9-8d6d-43dcadbb87ad
2020-08-22 23:53:06,935+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  Type: repository.yum.rebuild.metadata
2020-08-22 23:53:06,935+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  Name: Rebuild Yum metadata - mirror-1.3.0-opensuse-leap-15
2020-08-22 23:53:06,935+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  Description: Rebuild metadata for mirror-1.3.0-opensuse-leap-15
2020-08-22 23:53:06,936+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask - Task log: /nexus-data/log/tasks/repository.yum.rebuild.metadata-20200822235306934.log
2020-08-22 23:53:06,936+0000 INFO  [event-12-thread-797]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl - Rebuilding yum metadata for repository mirror-1.3.0-opensuse-leap-15
2020-08-22 23:53:06,936+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask - Task complete
2020-08-23 00:50:47,468+0000 INFO  [event-12-thread-797]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl - Finished rebuilding yum metadata for repository mirror-1.3.0-opensuse-leap-15

      The returned Finished rebuilding yum metadata for repository without any other ERROR or WARN messages indicates that the rebuild has completed successfully.

      In this case, it took nearly 58 minutes to finish. The time it takes to run is related to the size of the repository, so expect the mirror-1.3.0- repositories to take a while.

  12. Check the repodata for the repository again in the web UI.

    Repodata Summary

    Repodata Attributes

Troubleshooting

When a rebuild fails, expect to see ERROR and WARN messages around the same time as the Finished rebuilding yum metadata for repository message.

(ncn-mw#) For example, consider the log from a failed rebuild of mirror-1.3.0-opensuse-leap-15:

kubectl -n nexus exec -ti nexus-55d8c77547-65k6q -c nexus -- cat /nexus-data/log/tasks/repository.yum.rebuild.metadata-20200822231259523.log

Example output:

2020-08-22 23:12:59,523+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask - Task information:
2020-08-22 23:12:59,526+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  ID: 35536bcd-3947-4ba9-8d6d-43dcadbb87ad
2020-08-22 23:12:59,526+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  Type: repository.yum.rebuild.metadata
2020-08-22 23:12:59,526+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  Name: Rebuild Yum metadata - mirror-1.3.0-opensuse-leap-15
2020-08-22 23:12:59,527+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask -  Description: Rebuild metadata for mirror-1.3.0-opensuse-leap-15
2020-08-22 23:12:59,529+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask - Task log: /nexus-data/log/tasks/repository.yum.rebuild.metadata-20200822231259523.log
2020-08-22 23:12:59,529+0000 INFO  [event-12-thread-780]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl - Rebuilding yum metadata for repository mirror-1.3.0-opensuse-leap-15
2020-08-22 23:12:59,531+0000 INFO  [quartz-9-thread-20]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.task.YumCreateRepoTask - Task complete
2020-08-22 23:24:16,974+0000 INFO  [Thread-1948 <command>sql.select from asset where (component IS NOT NULL  AND attributes.yum.asset_kind = :p0) and (bucket=#59:1)</command>]  *SYSTEM com.orientechnologies.common.profiler.OProfilerStub - $ANSI{green {db=component}} [TIP] Query 'SELECT FROM asset WHERE (component IS NOT NULL AND attributes.yum.asset_kind = "RPM" ) AND (bucket = #59:1 )' returned a result set with more than 10000 records. Check if you really need all these records, or reduce the resultset by using a LIMIT to improve both performance and used RAM
2020-08-22 23:29:57,700+0000 INFO  [event-12-thread-780]  *SYSTEM org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl - Finished rebuilding yum metadata for repository mirror-1.3.0-opensuse-leap-15
2020-08-22 23:29:57,701+0000 ERROR [event-12-thread-780]  *SYSTEM com.google.common.eventbus.EventBus.nexus.async - Could not dispatch event org.sonatype.nexus.repository.yum.internal.createrepo.YumMetadataInvalidationEvent@75b487e7 to subscriber org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl$$EnhancerByGuice$$9db995@93053b8 method [public void org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl.on(org.sonatype.nexus.repository.yum.internal.createrepo.YumMetadataInvalidationEvent)]
org.sonatype.nexus.repository.InvalidContentException: Invalid RPM: external/noarch/redeclipse-data-1.5.6-lp151.2.5.noarch.rpm
    at org.sonatype.nexus.repository.yum.internal.rpm.YumRpmParser.parse(YumRpmParser.java:108)
    at org.sonatype.nexus.repository.yum.internal.rpm.YumRpmParser.parse(YumRpmParser.java:76)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.writeAssetToMetadata(CreateRepoServiceImpl.java:651)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.appendRpm(CreateRepoServiceImpl.java:511)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.loopAllRpmsAndAppend(CreateRepoServiceImpl.java:499)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.writeMetadata(CreateRepoServiceImpl.java:477)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.convertDirectoriesToMetadata(CreateRepoServiceImpl.java:180)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.buildMetadata(CreateRepoServiceImpl.java:150)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.buildMetadata(CreateRepoServiceImpl.java:134)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.buildMetadataWithoutCaching(CreateRepoServiceImpl.java:125)
    at org.sonatype.nexus.transaction.TransactionalWrapper.proceedWithTransaction(TransactionalWrapper.java:57)
    at org.sonatype.nexus.transaction.TransactionInterceptor.proceedWithTransaction(TransactionInterceptor.java:66)
    at org.sonatype.nexus.transaction.TransactionInterceptor.invoke(TransactionInterceptor.java:55)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl.buildMetadata(CreateRepoFacetImpl.java:196)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl.on(CreateRepoFacetImpl.java:178)
    at sun.reflect.GeneratedMethodAccessor125.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.google.common.eventbus.Subscriber.invokeSubscriberMethod(Subscriber.java:87)
    at com.google.common.eventbus.Subscriber$SynchronizedSubscriber.invokeSubscriberMethod(Subscriber.java:144)
    at com.google.common.eventbus.Subscriber$1.run(Subscriber.java:72)
    at org.sonatype.nexus.thread.internal.MDCAwareRunnable.run(MDCAwareRunnable.java:40)
    at org.apache.shiro.subject.support.SubjectRunnable.doRun(SubjectRunnable.java:120)
    at org.apache.shiro.subject.support.SubjectRunnable.run(SubjectRunnable.java:108)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)
Caused by: java.net.SocketTimeoutException: Read timed out
    at java.net.SocketInputStream.socketRead0(Native Method)
    at java.net.SocketInputStream.socketRead(SocketInputStream.java:116)
    at java.net.SocketInputStream.read(SocketInputStream.java:171)
    at java.net.SocketInputStream.read(SocketInputStream.java:141)
    at org.apache.http.impl.io.SessionInputBufferImpl.streamRead(SessionInputBufferImpl.java:137)
    at org.apache.http.impl.io.SessionInputBufferImpl.read(SessionInputBufferImpl.java:198)
    at org.apache.http.impl.io.ContentLengthInputStream.read(ContentLengthInputStream.java:176)
    at org.apache.http.conn.EofSensorInputStream.read(EofSensorInputStream.java:135)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.event.ProgressInputStream.read(ProgressInputStream.java:180)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.services.s3.internal.S3AbortableInputStream.read(S3AbortableInputStream.java:125)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.event.ProgressInputStream.read(ProgressInputStream.java:180)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.util.LengthCheckInputStream.read(LengthCheckInputStream.java:107)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
    at java.io.BufferedInputStream.read1(BufferedInputStream.java:286)
    at java.io.BufferedInputStream.read(BufferedInputStream.java:345)
    at com.google.common.io.CountingInputStream.read(CountingInputStream.java:63)
    at java.security.DigestInputStream.read(DigestInputStream.java:161)
    at java.io.FilterInputStream.read(FilterInputStream.java:107)
    at com.google.common.io.ByteStreams.exhaust(ByteStreams.java:273)
    at org.sonatype.nexus.repository.yum.internal.rpm.YumRpmParser.parse(YumRpmParser.java:97)
    ... 26 common frames omitted
2020-08-22 23:30:06,427+0000 WARN  [Thread-1948 <command>sql.select from asset where (component IS NOT NULL  AND attributes.yum.asset_kind = :p0) and (bucket=#59:1)</command>]  *SYSTEM org.sonatype.nexus.repository.storage.OrientAsyncHelper$QueueFeedingResultListener - Timed out adding query result to queue 28dee0bf after 60 seconds, aborting query
2020-08-22 23:31:06,430+0000 WARN  [Thread-1948 <command>sql.select from asset where (component IS NOT NULL  AND attributes.yum.asset_kind = :p0) and (bucket=#59:1)</command>]  *SYSTEM org.sonatype.nexus.repository.storage.OrientAsyncHelper$QueueFeedingResultListener - Timed out adding end marker to queue 28dee0bf after 60 seconds

Any SQL warnings or notifications indicate the rebuild may have failed. Examine repodata/*.xml.gz file attributes, such as file size and last modified time, to determine if they are new compared to the timestamp on the Finished rebuilding yum metadata for repository message.

2020-08-22 23:24:16,974+0000 INFO  [Thread-1948 <command>sql.select from asset where (component IS NOT NULL  AND attributes.yum.asset_kind = :p0) and (bucket=#59:1)</command>]  *SYSTEM com.orientechnologies.common.profiler.OProfilerStub - $ANSI{green {db=component}} [TIP] Query 'SELECT FROM asset WHERE (component IS NOT NULL AND attributes.yum.asset_kind = "RPM" ) AND (bucket = #59:1 )' returned a result set with more than 10000 records. Check if you really need all these records, or reduce the resultset by using a LIMIT to improve both performance and used RAM
...
2020-08-22 23:30:06,427+0000 WARN  [Thread-1948 <command>sql.select from asset where (component IS NOT NULL  AND attributes.yum.asset_kind = :p0) and (bucket=#59:1)</command>]  *SYSTEM org.sonatype.nexus.repository.storage.OrientAsyncHelper$QueueFeedingResultListener - Timed out adding query result to queue 28dee0bf after 60 seconds, aborting query
2020-08-22 23:31:06,430+0000 WARN  [Thread-1948 <command>sql.select from asset where (component IS NOT NULL  AND attributes.yum.asset_kind = :p0) and (bucket=#59:1)</command>]  *SYSTEM org.sonatype.nexus.repository.storage.OrientAsyncHelper$QueueFeedingResultListener - Timed out adding end marker to queue 28dee0bf after 60 seconds

However, seeing an ERROR with a JVM stack trace is a key indication that the rebuild failed:

2020-08-22 23:29:57,701+0000 ERROR [event-12-thread-780]  *SYSTEM com.google.common.eventbus.EventBus.nexus.async - Could not dispatch event org.sonatype.nexus.repository.yum.internal.createrepo.YumMetadataInvalidationEvent@75b487e7 to subscriber org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl$$EnhancerByGuice$$9db995@93053b8 method [public void org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl.on(org.sonatype.nexus.repository.yum.internal.createrepo.YumMetadataInvalidationEvent)]
org.sonatype.nexus.repository.InvalidContentException: Invalid RPM: external/noarch/redeclipse-data-1.5.6-lp151.2.5.noarch.rpm
    at org.sonatype.nexus.repository.yum.internal.rpm.YumRpmParser.parse(YumRpmParser.java:108)
    at org.sonatype.nexus.repository.yum.internal.rpm.YumRpmParser.parse(YumRpmParser.java:76)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.writeAssetToMetadata(CreateRepoServiceImpl.java:651)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.appendRpm(CreateRepoServiceImpl.java:511)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.loopAllRpmsAndAppend(CreateRepoServiceImpl.java:499)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.writeMetadata(CreateRepoServiceImpl.java:477)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.convertDirectoriesToMetadata(CreateRepoServiceImpl.java:180)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.buildMetadata(CreateRepoServiceImpl.java:150)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.buildMetadata(CreateRepoServiceImpl.java:134)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoServiceImpl.buildMetadataWithoutCaching(CreateRepoServiceImpl.java:125)
    at org.sonatype.nexus.transaction.TransactionalWrapper.proceedWithTransaction(TransactionalWrapper.java:57)
    at org.sonatype.nexus.transaction.TransactionInterceptor.proceedWithTransaction(TransactionInterceptor.java:66)
    at org.sonatype.nexus.transaction.TransactionInterceptor.invoke(TransactionInterceptor.java:55)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl.buildMetadata(CreateRepoFacetImpl.java:196)
    at org.sonatype.nexus.repository.yum.internal.createrepo.CreateRepoFacetImpl.on(CreateRepoFacetImpl.java:178)
    at sun.reflect.GeneratedMethodAccessor125.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.google.common.eventbus.Subscriber.invokeSubscriberMethod(Subscriber.java:87)
    at com.google.common.eventbus.Subscriber$SynchronizedSubscriber.invokeSubscriberMethod(Subscriber.java:144)
    at com.google.common.eventbus.Subscriber$1.run(Subscriber.java:72)
    at org.sonatype.nexus.thread.internal.MDCAwareRunnable.run(MDCAwareRunnable.java:40)
    at org.apache.shiro.subject.support.SubjectRunnable.doRun(SubjectRunnable.java:120)
    at org.apache.shiro.subject.support.SubjectRunnable.run(SubjectRunnable.java:108)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)
Caused by: java.net.SocketTimeoutException: Read timed out
    at java.net.SocketInputStream.socketRead0(Native Method)
    at java.net.SocketInputStream.socketRead(SocketInputStream.java:116)
    at java.net.SocketInputStream.read(SocketInputStream.java:171)
    at java.net.SocketInputStream.read(SocketInputStream.java:141)
    at org.apache.http.impl.io.SessionInputBufferImpl.streamRead(SessionInputBufferImpl.java:137)
    at org.apache.http.impl.io.SessionInputBufferImpl.read(SessionInputBufferImpl.java:198)
    at org.apache.http.impl.io.ContentLengthInputStream.read(ContentLengthInputStream.java:176)
    at org.apache.http.conn.EofSensorInputStream.read(EofSensorInputStream.java:135)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.event.ProgressInputStream.read(ProgressInputStream.java:180)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.services.s3.internal.S3AbortableInputStream.read(S3AbortableInputStream.java:125)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.event.ProgressInputStream.read(ProgressInputStream.java:180)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at com.amazonaws.util.LengthCheckInputStream.read(LengthCheckInputStream.java:107)
    at com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:82)
    at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
    at java.io.BufferedInputStream.read1(BufferedInputStream.java:286)
    at java.io.BufferedInputStream.read(BufferedInputStream.java:345)
    at com.google.common.io.CountingInputStream.read(CountingInputStream.java:63)
    at java.security.DigestInputStream.read(DigestInputStream.java:161)
    at java.io.FilterInputStream.read(FilterInputStream.java:107)
    at com.google.common.io.ByteStreams.exhaust(ByteStreams.java:273)
    at org.sonatype.nexus.repository.yum.internal.rpm.YumRpmParser.parse(YumRpmParser.java:97)
    ... 26 common frames omitted